PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID AHYPO_018261-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Amaranthaceae; Amaranthus
Family MYB_related
Protein Properties Length: 987aa    MW: 109422 Da    PI: 8.742
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
AHYPO_018261-RAgenomeBYUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.91.1e-084277340
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40
                      W++ E e++++a +++G + Wk++a  +   R+ +++
  AHYPO_018261-RA 42 QWSEHEIERFYEAYRKHGQD-WKKVAVSVR-SRSIEMV 77
                     6*****************99.*******99.9998765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.5E-83884IPR009057Homeodomain-like
PfamPF002498.0E-74277IPR001005SANT/Myb domain
CDDcd001674.81E-54377No hitNo description
PfamPF065844.5E-26525624IPR033471DIRP domain
SMARTSM011351.6E-34525625IPR033471DIRP domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 987 aa     Download sequence    Send to blast
MAPSKKSKSV NGGFASASDS SPSKDDKSKQ KKRKLSNLLG PQWSEHEIER FYEAYRKHGQ  60
DWKKVAVSVR SRSIEMVEAL YSMSRAYLSL PEGTASVHGF KAMMIDHYNA LEGSDSEKAT  120
KEPEVIARKF KKIPKTKVLI DSSRDDAKHK PAGSSHGCLA LLKNKGDDSF PHIPVKKRTP  180
RVLVSLFSNK KFEVAGTNAI EDGSQTTYQK IGHMRTLQVS DKEELISPFL AAKGKNGVYA  240
APEESKEDRL ARNVAKIGNL ARNSMHPGTS ALAAEYKNGE KRKKEEVQQS EALFFDNIQK  300
TYDHSNRGTK RNNYDDELAA CDALQTLAEI SAMMPYIAKE SVKDAEESMI GWNTTVNPVA  360
RSNVTLSNEK MKGESNKKHN QASNVNQKAE SLINCSRKSS KNETAVNEEV KSADSSGKVS  420
GISIRCKSSD RSPHLSLSND SHSGDIEAAV SSTQMDTAGY IIIPTKKSRR KRDRTSHFKN  480
TYNAPNGCSG TGLPVLQNKL QDGEGMLLHC LSWPEARRWC VYEWFYSAID YPWFAKRDFM  540
EYLNHAGLGH IPRLTRAELG IIRGSLGKPR RFSKCFLQQQ RERLNYYRES VRDHYVNFRA  600
GLGEVPTDLL YPLRVGQQVV AIHPKTRDCH NGKVLSVQRD NCLVQFHCPD LGVEVVLDID  660
CMPLNLLENM PEAMRRERMQ FDHRHIQVSK ANGSIVSAPM EHMINVDPHL SVPPRSLTTA  720
NDIKVKPSFS NSLTKVAANG SIKTQSATQN QSCSFVQIHS QEGYMRNVPE FKEGLDRKVY  780
EQLNGCSENL PLNSVGLNGK MHSSHNSSLC CQEIASNVAG IVEDSRKKAL KLVDTAIKEI  840
TSKKEGDDKF RRISEALDRN GKAECASNCG TSMTMSSNEI QGSLPHQNPT ISCSSDPQLA  900
CDMISSQSAG DSDLEVPSDL ITSCVATVLM IQTCTERQHP PAEVAQILDN AATSLHPCCP  960
QNLSIYRDIQ MCMGIIKTQI LALVPT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010674728.10.0PREDICTED: protein ALWAYS EARLY 2-like isoform X2
TrEMBLA0A0J8CNZ20.0A0A0J8CNZ2_BETVU; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21430.21e-108DNA binding